Bilateral Filtering of Multiple Fiber Orientations in Diffusion MRI

نویسندگان

  • Ryan P. Cabeen
  • David H. Laidlaw
چکیده

We present and evaluate a bilateral filter for smoothing diffusion MRI fiber orientations with preservation of anatomical boundaries and support for multiple fibers per voxel. Two challenges in the process are the geometric structure of fiber orientations and the combinatorial problem of matching multiple fibers across voxels. To address these issues, we define distances and local estimators of weighted collections of multi-fiber models and show that these provide a basis for an efficient bilateral filtering algorithm for orientation data. We evaluate our approach with experiments testing the effect on tractography-based reconstruction of fiber bundles and response to synthetic noise in computational phantoms and clinical human brain data. We found this to significantly reduce the effects of noise and to avoid artifacts introduced by linear filtering. This approach has potential applications to diffusion MR tractography, brain connectivity mapping, and cardiac modeling.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Estimating the number of fiber orientations in diffusion MRI voxels: a constrained spherical deconvolution study

Introduction: It has long been recognized that the Gaussian diffusion tensor model is inappropriate for voxels with complex fiber architecture [1, 2]. Many groups have tried to classify voxels in terms of their diffusion complexity. The earliest studies distinguished between voxels with isotropic, single-fiber anisotropic, and multifiber anisotropic complexity and have reported clustered and sy...

متن کامل

Estimating Constrained Multi-fiber Diffusion MR Volumes by Orientation Clustering

Diffusion MRI is a valuable tool for mapping tissue microstructure; however, multi-fiber models present challenges to image analysis operations. In this paper, we present a method for estimating models for such operations by clustering fiber orientations. Our approach is applied to ball-and-stick diffusion models, which include an isotropic tensor and multiple sticks encoding fiber volume and o...

متن کامل

Determination of Fiber Direction in High Angular Resolution Diffusion Images using Spherical Harmonics Functions and Wiener Filter

Diffusion tensor imaging (DTI) MRI is a noninvasive imaging method of the cerebral tissues whose fibers directions are not evaluated correctly in the regions of the crossing fibers. For the same reason the high angular resolution diffusion images (HARDI) are used for estimation of the fiber direction in each voxel. One of the main methods to specify the direction of fibers is usage of the spher...

متن کامل

From Diffusion Mri to Brain Connectomics

The success of diffusion MRI is deeply rooted in the fact that during their micrometric random displacements water molecules explore tissue microstructure. Hence by labeling magnetically spins of displaced water, diffusion MRI provides us with exquisite information about the sizes and orientations on the multiple compartments present inside an imaging voxel. Through the causal relation between ...

متن کامل

Probabilistic white matter fiber tracking using particle filtering and von Mises-Fisher sampling

Standard particle filtering technique have previously been applied to the problem of fiber tracking by Brun et al. [Brun, A., Bjornemo, M., Kikinis, R., Westin, C.F., 2002. White matter tractography using sequential importance sampling. In: Proceedings of the ISMRM Annual Meeting, p. 1131] and Bjornemo et al. [Bjornemo, M., Brun, A., Kikinis, R., Westin, C.F., 2002. Regularized stochastic white...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2014